Summarizing Regional Methylation with Regional Principal
Components Analysis
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Documentation for package ‘regionalpcs’ version 1.4.0
Help Pages
| combine_results | Combine results dataframes across regions |
| compute_dimension | Compute significant dimensions of a matrix using the Marchenko-Pastur or Gavish-Donoho methods |
| compute_regional_pcs | Compute regional principal components for methylation data |
| create_region_map | Create a Region Map Between CpGs and Gene Regions |
| get_sig_pcs | Get significant principal components |
| summarize_region | Summarize a region using regional principal components |