Profile score distributions
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Documentation for package ‘profileScoreDist’ version 1.33.0
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| backgroundDist | Background distribution. |
| backgroundDist-method | ProfileDist |
| computeScoreDist | Compute exact position weight/count matrix score distribution. |
| INR | The position count matrix for INR. |
| plotDist | Plot background and signal distributions. |
| plotDist-method | ProfileDist |
| ProfileDist | ProfileDist |
| ProfileDist-class | ProfileDist |
| regularizeMatrix | Careful regularization (pseudocount addition) to a position count matrix. |
| score-method | ProfileDist |
| scoreDistCutoffs | False discovery rate and power for PWM Score distributions. |
| show-method | ProfileDist |
| signalDist | Signal distribution. |
| signalDist-method | ProfileDist |