bisqueParam	bisqueParam
BisqueParam-class	bisqueParam-class
bisqueParam-class	bisqueParam-class
cellProportionsPredictions	cellProportionsPredictions
cellProportionsPredictions-class	cellProportionsPredictions-class
deconParam-class	deconvolutionParam-class
DeconParam-class,	deconvolutionParam-class
Deconvolute	deconvolution
deconvolute,	deconvolution
deconvolution	deconvolution
Deconvolution,	deconvolution
deconvolution,bisqueParam-method	deconvolution-bisqueParam-method
deconvolution,deconvolutionParam-method	deconvolution-deconvolutionParam-method
deconvolution,independentbulkParam-method	deconvolution-independentbulkParam-method
deconvolution,nnlsParam-method	deconvolution-nnlsParam-method
deconvolution,referencebasedParam-method	deconvolution-referencebasedParam-method
deconvolutionParam-class	deconvolutionParam-class
DeconvolutionParam-class,	deconvolutionParam-class
eset_to_sce	eset_to_sce
eset_to_se	eset_to_se
findmarkersParam	findmarkersParam
findMarkersParam-class	findmarkersParam-class
findmarkersParam-class	findmarkersParam-class
FindmarkersParam-class,	findmarkersParam-class
getDeconvolutionExampleData	getDeconvolutionExampleData
getDeconvolutionExampleDataBisque	getDeconvolutionExampleDataBisque
getDeconvolutionExampleDataSCDC	getDeconvolutionExampleDataSCDC
get_celltypes_from_sce	get_celltypes_from_sce
get_csf_reference	get_csf_reference
get_eset_from_matrix	get_eset_from_matrix
independentbulkParam	independentbulkParam
independentbulkParam-class	independentbulkParam-class
lute	lute
luteSupportedDeconvolutionAlgorithms	luteSupportedDeconvolutionAlgorithms
new_workflow_table	new_workflow_table
nnlsParam	nnlsParam
NNLSParam-class	nnlsParam-class
nnlsParam-class	nnlsParam-class
parseDeconvolutionPredictionsResults	parseDeconvolutionPredictionsResults
proportionsVectorsList	proportionsVectorsList
randomMarkersVectorsList	randomMarkersVectorsList
randomSingleCellExperiment	randomSingleCellExperiment
referencebasedParam	referencebasedParam
referencebasedParam-class	referencebasedParam-class
referenceFromSingleCellExperiment	referenceFromSingleCellExperiment
rmse	rmse
rmseTest	rmseTest
sce_to_eset	sce_to_eset
sce_to_se	sce_to_se
se_to_eset	se_to_eset
se_to_sce	se_to_sce
show,bisqueParam-method	show-bisqueParam-method
show,cellProportionsPredictions-method	show-cellProportionsPredictions-method
show,deconvolutionParam-method	show-deconvolutionParam-method
show,findmarkersParam-method	show-findmarkersParam-method
show,independentbulkParam-method	show-independentbulkParam-method
show,nnlsParam-method	show-nnlsParam-method
show,referencebasedParam-method	show-referencebasedParam-method
show,typemarkersParam-method	show-typemarkersParam-method
TypeMarkers	typemarkers
typemarkers	typemarkers
Typemarkers,	typemarkers
typemarkers,findmarkersParam-method	typemarkers-findmarkersParam-method
typemarkers,typemarkersParam-method	typemarkers-typemarkersParam-method
typemarkersParam	typemarkersParam
TypeMarkersParam-class	typemarkersParam-class
typemarkersParam-class	typemarkersParam-class
TypemarkersParam-class,	typemarkersParam-class
ypb_from_sce	ypb_from_sce
z_matrix_from_sce	z_matrix_from_sce
[[,deconvolutionParam,ANY,ANY-method	sub-sub-deconvolutionParam-ANY-ANY-method
[[,typemarkersParam,ANY,ANY-method	sub-sub-typemarkersParam-ANY-ANY-method
