Exploring the Human Cell Atlas Data Coordinating Platform


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Documentation for package ‘hca’ version 1.14.0

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.details Single Entity Details
as.list.lol Representing and manipulating list-of-list data structures.
bundles HCA Bundle Querying
bundles_default_columns HCA Bundle Querying
bundles_detail HCA Bundle Querying
bundles_facets HCA Bundle Querying
catalogs Catalogs Available in the HCA
facet_options HCA Filter Construction
files HCA File Querying
files_cache HCA File Querying
files_default_columns HCA File Querying
files_detail HCA File Querying
files_download HCA File Querying
files_facets HCA File Querying
filters HCA Filter Construction
hca_next Page through HCA results
hca_next.list_hca 'list' representation of HCA query results
hca_next.lol_hca Representing and manipulating list-of-list data structures.
hca_next.tbl_hca 'tibble' representation of HCA query results
hca_prev Page through HCA results
hca_prev.list_hca 'list' representation of HCA query results
hca_prev.lol_hca Representing and manipulating list-of-list data structures.
hca_prev.tbl_hca 'tibble' representation of HCA query results
hca_view View and select table rows interactively
length.filters HCA Filter Construction
lol Representing and manipulating list-of-list data structures.
lol_filter Representing and manipulating list-of-list data structures.
lol_hits_lpull Representing and manipulating list-of-list data structures.
lol_hits_pull Representing and manipulating list-of-list data structures.
lol_lpull Representing and manipulating list-of-list data structures.
lol_path Representing and manipulating list-of-list data structures.
lol_pull Representing and manipulating list-of-list data structures.
lol_select Representing and manipulating list-of-list data structures.
manifest HCA File Querying
manifest_cache HCA File Querying
optimus_loom_annotation HCA loom file annotation
optimus_loom_annotation.character HCA loom file annotation
optimus_loom_annotation.LoomExperiment HCA loom file annotation
print.filters HCA Filter Construction
print.lol Representing and manipulating list-of-list data structures.
print.project_information Project Summaries from Project IDs
projects HCA Project Querying
projects_default_columns HCA Project Querying
projects_detail HCA Project Querying
projects_facets HCA Project Querying
project_information Project Summaries from Project IDs
project_title Project Summaries from Project IDs
samples HCA Sample Querying
samples_default_columns HCA Sample Querying
samples_detail HCA Sample Querying
samples_facets HCA Sample Querying
summary Repository summary statistics