Signature discovery from omics data

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Documentation for package ‘biosigner’ version 1.34.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

biosigner-package	Molecular signature discovery from omics data
biosign	Builds the molecular signature.
biosign,MultiDataSet_method	Builds the molecular signature.
biosign-class	Class "biosign"
biosign-method	Builds the molecular signature.
biosign-method	getEset method
biosigner	Molecular signature discovery from omics data
biosignMultiDataSet-class	Class "biosignMultiDataSet"
biosignMultiDataSet-method	getMset method
diaplasma	Analysis of plasma from diabetic patients by LC-HRMS
getAccuracyMN	Accuracies of the full model and the models restricted to the signatures
getAccuracyMN-method	Accuracies of the full model and the models restricted to the signatures
getBiosign	Getting the biosigner signature from the SummarizedExperiment object
getBiosign-method	Getting the biosigner signature from the SummarizedExperiment object
getEset	getEset method
getEset,	getEset method
getEset-method	getEset method
getMset	getMset method
getMset,	getMset method
getMset-method	getMset method
getSignatureLs	Signatures selected by the models
getSignatureLs-method	Signatures selected by the models
plot-method	Plot method for 'biosign' signature objects
plot.biosign	Plot method for 'biosign' signature objects
plot.biosignMultiDataSet	Plot method for 'biosign' signature objects
predict-method	Predict method for 'biosign' signature objects
predict.biosign	Predict method for 'biosign' signature objects
show-method	Show method for 'biosign' signature objects
show.biosign	Show method for 'biosign' signature objects