Advanced package of tensor decomposition based unsupervised feature extraction


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Documentation for package ‘TDbasedUFEadv’ version 1.6.0

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computeSVD Title Perform SVD toward reduced matrix generated from a tensor with partial summation
prepareCondDrugandDisease Prepare condition matrix for expDrug
prepareCondTCGA Prepare Sample label for TCGA data
prepareexpDrugandDisease Generating gene expression of drug treated cell lines and a disease cell line
prepareTensorfromList Prepare tensor from a list that includes multiple profiles
prepareTensorfromMatrix Generate tensor from two matrices
prepareTensorRect Prepare tensor generated from two matrices that share samples
selectFeatureProj Select feature when projection strategy is employed for the case where features are shared with multiple omics profiles
selectFeatureRect Select features through the selection of singular value vectors
selectFeatureTransRect Select features for a tensor generated from two matrices that share samples.
TensorRect-class Class definitions
transSVD Convert SVD to that for the case where samples are shared between two matrices