An R package for qualitative biclustering in support of gene co-expression analyses


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Documentation for package ‘QUBIC’ version 1.33.0

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BCQU QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
bcqu QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
BCQU-class Class BCQU.
BCQUD QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
BCQUD-class QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
biclust-method QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
network Construction and visualization of co-expression network
qdiscretize Create a qualitative discrete matrix for a given gene expression matrix
Qnetwork Construction and visualization of co-expression network
QUBIC QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
qubic QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
QUBICD QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
qubiclust QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
qubiclust_d QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
qubic_d QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
QUD QUBIC: A Qualitative Biclustering Algorithm for Analyses of Gene Expression Data
qudiscretize Create a qualitative discrete matrix for a given gene expression matrix
quheatmap Visualization of identified biclusters
qunet2xml Convert newwork to XGMML
Qunetwork Construction and visualization of co-expression network
qunetwork Construction and visualization of co-expression network
showinfo Show report of biclusters