Utilities for Annotation of Metabolomics Data
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Documentation for package ‘MetaboAnnotation’ version 1.9.1
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| $-method | Representation of generic objects matches |
| $-method | Representation of Spectra matches |
| addMatches | Representation of generic objects matches |
| addMatches-method | Representation of generic objects matches |
| addProcessing-method | Representation of Spectra matches |
| colnames-method | Representation of generic objects matches |
| colnames-method | Representation of Spectra matches |
| CompAnnotationSource | Compound Annotation Sources |
| CompAnnotationSource-class | Compound Annotation Sources |
| CompareSpectraParam | Matching MS Spectra against a reference |
| CompareSpectraParam-class | Matching MS Spectra against a reference |
| CompDbSource | Compound Annotation Sources for 'CompDb' databases |
| CompDbSource-class | Compound Annotation Sources for 'CompDb' databases |
| createStandardMixes | Create Standard Mixes from a Matrix of Standard Compounds |
| endoapply | Representation of generic objects matches |
| endoapply-method | Representation of generic objects matches |
| filterMatches | Representation of generic objects matches |
| filterMatches-method | Representation of generic objects matches |
| lapply-method | Representation of generic objects matches |
| length-method | Representation of generic objects matches |
| Mass2MzParam | Matching of numeric values |
| Mass2MzRtParam | Matching of numeric values |
| MassBankSource | Compound Annotation Sources for 'CompDb' databases |
| Matched | Representation of generic objects matches |
| Matched-class | Representation of generic objects matches |
| matchedData | Representation of generic objects matches |
| matchedData-method | Representation of generic objects matches |
| matchedData-method | Representation of Spectra matches |
| MatchedSpectra | Representation of Spectra matches |
| MatchedSpectra-class | Representation of Spectra matches |
| matches | Representation of generic objects matches |
| matchFormula | Chemical Formula Matching |
| matchFormula-method | Chemical Formula Matching |
| MatchForwardReverseParam | Matching MS Spectra against a reference |
| MatchForwardReverseParam-class | Matching MS Spectra against a reference |
| matchMz | Matching of numeric values |
| matchSpectra | Spectral matching |
| matchSpectra-method | Compound Annotation Sources |
| matchSpectra-method | Matching MS Spectra against a reference |
| matchValues | Matching of numeric values |
| matchValues-method | Matching of numeric values |
| metadata-method | Compound Annotation Sources |
| metadata-method | Compound Annotation Sources for 'CompDb' databases |
| Mz2MassParam | Matching of numeric values |
| Mz2MassRtParam | Matching of numeric values |
| MzParam | Matching of numeric values |
| MzRtParam | Matching of numeric values |
| plotSpectraMirror-method | Representation of Spectra matches |
| pruneTarget | Representation of generic objects matches |
| query-method | Representation of generic objects matches |
| queryIndex | Representation of generic objects matches |
| queryVariables | Representation of generic objects matches |
| queryVariables-method | Representation of generic objects matches |
| queryVariables-method | Representation of Spectra matches |
| ScoreThresholdParam | Representation of generic objects matches |
| scoreVariables | Representation of generic objects matches |
| SelectMatchesParam | Representation of generic objects matches |
| setBackend-method | Representation of Spectra matches |
| show-method | Compound Annotation Sources |
| show-method | Compound Annotation Sources for 'CompDb' databases |
| show-method | Representation of generic objects matches |
| SingleMatchParam | Representation of generic objects matches |
| spectraData-method | Representation of Spectra matches |
| spectraVariables-method | Representation of Spectra matches |
| target | Representation of generic objects matches |
| targetIndex | Representation of generic objects matches |
| targetVariables | Representation of generic objects matches |
| targetVariables-method | Representation of generic objects matches |
| targetVariables-method | Representation of Spectra matches |
| TopRankedMatchesParam | Representation of generic objects matches |
| validateMatchedSpectra | Validating MatchedSpectra |
| ValueParam | Matching of numeric values |
| whichQuery | Representation of generic objects matches |
| whichTarget | Representation of generic objects matches |
| [-method | Representation of generic objects matches |