Predicting Targets for Drosophila Intragenic miRNAs


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Documentation for package ‘IntramiRExploreR’ version 1.27.0

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Affy1_Distance_Final Targets for the microRNA analyzed from Affy1 plaform using Distance.
Affy1_Pearson_Final Targets for the microRNA analyzed from Affy1 plaform using Pearson.
Affy2_Distance_Final Targets for the microRNA analyzed from Affy2 plaform using Distance.
Affy2_Pearson_Final Targets for the microRNA analyzed from Affy2 plaform using Pearson.
extract_HostGene Extract Host Gene for a given Intragenic miRNA.
extract_intragenic_miR Extract Intragenic miRNA for a given Host gene.
genes_Stat Extracting miRNAs that target a query gene.
Gene_Visualisation Visualises the targetGene:miRNA network using Cytoscape and igraph .
GetGOS_ALL Gene ontology for Target Genes.
IntramiRExploreR IntramiRExploreR:Prediction of targets for Intragenic miRNA in Drosophila.
miRNA_ID_to_Function Contains the miRNA function information from Flybase database.
miRNA_summary_DB Contains the summary for the intragenic miRNA.
miRTargets_Stat Extracting miRNAs that target a query gene.
Visualisation Visualises the targetGene:miRNA network using Cytoscape and igraph .