Predicting Targets for Drosophila Intragenic miRNAs

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Documentation for package ‘IntramiRExploreR’ version 1.27.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

Affy1_Distance_Final	Targets for the microRNA analyzed from Affy1 plaform using Distance.
Affy1_Pearson_Final	Targets for the microRNA analyzed from Affy1 plaform using Pearson.
Affy2_Distance_Final	Targets for the microRNA analyzed from Affy2 plaform using Distance.
Affy2_Pearson_Final	Targets for the microRNA analyzed from Affy2 plaform using Pearson.
extract_HostGene	Extract Host Gene for a given Intragenic miRNA.
extract_intragenic_miR	Extract Intragenic miRNA for a given Host gene.
genes_Stat	Extracting miRNAs that target a query gene.
Gene_Visualisation	Visualises the targetGene:miRNA network using Cytoscape and igraph .
GetGOS_ALL	Gene ontology for Target Genes.
IntramiRExploreR	IntramiRExploreR:Prediction of targets for Intragenic miRNA in Drosophila.
miRNA_ID_to_Function	Contains the miRNA function information from Flybase database.
miRNA_summary_DB	Contains the summary for the intragenic miRNA.
miRTargets_Stat	Extracting miRNAs that target a query gene.
Visualisation	Visualises the targetGene:miRNA network using Cytoscape and igraph .