A Deep-Learning Framework Based on Pre-trained Sequence Embeddings for Predicting Host-Viral Protein-Protein Interactions

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Documentation for package ‘DeProViR’ version 1.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

encodeHostSeq	Host Protein Sequence Encoding with GloVe Embedding Vectors
encodeViralSeq	Viral Protein Sequence Encoding with GloVe Embedding Vectors
gloveImport	Cache and Load Pre-Trained Word Vectors
loadPreTrainedModel	Load Pre-Trained Model Weights
loadTrainingSet	Load Demo Training Set
modelTraining	Predictive Model Training using k-fold Validation Strategy
performancePlots	Model Performance Evalution
predInteractions	Predict Unknown Interactions