Identification of gene fusions using paired-end sequencing
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Documentation for package ‘DNAfusion’ version 1.8.0
Help Pages
| ALK_sequence | Identification of ALK breakpoint bases |
| break_position | EML4-ALK breakpoint |
| break_position_depth | Read depth at breakpoint |
| EML4_ALK_analysis | Complete EML4-ALK analysis |
| EML4_ALK_detection | Detection of ALK and EML4 breakpoint |
| EML4_sequence | Identification of EML4 breakpoint bases |
| find_variants | Detect the variants of ALK-EML4 |
| introns_ALK_EML4 | Detect ALK and EML4 introns of the breakpoint |