Agreement of Differential Expression Analysis
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Documentation for package ‘AGDEX’ version 1.53.0
Help Pages
| AGDEX-package | Agreement of differential expression analysis |
| agdex | Agreement of Differential Expression Analysis |
| agdex.res | Saved result returned by agdex() |
| agdex.scatterplot | scatter plot of AGDEX result |
| get.gset.result.details | Extract gene-level details from gene-set results |
| gset.data | a sample gene-set data |
| human.data | Sample ExpressionSet object of human data |
| make.dex.set.object | Make a list object for function agdex() |
| map.data | Probe-set Mapping Data |
| mouse.data | Mouse Data |
| read.agdex.gset.details | read detailed results of gene-set analyses |
| read.agdex.result | Read the output file of agdex analysis |
| write.agdex.gset.details | write the output of get.gset.result.details to a tab-delimited text file. |
| write.agdex.result | Write the AGDEX results to output file |