Trajectory functions for visualization and interpretation.

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Documentation for package ‘traviz’ version 1.11.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

counts	A count matrix, used for testing.
crv	A SlingshotDataset object, used for testing.
lines-method	Plot Slingshot output
plot-method	Plot Slingshot output
plot-SlingshotDataSet	Plot Slingshot output
plot3d-SlingshotDataSet	Plot Slingshot output in 3D
plot3d.SlingshotDataSet	Plot Slingshot output in 3D
plotExpression	Plot gene expression along pseudotime.
plotExpression-method	Plot gene expression along pseudotime.
plotGeneCount	Plot gene expression in reduced dimension.
plotGeneCount-method	Plot gene expression in reduced dimension.
plotSmoothers	Plot the log-transformed counts and the fitted values for a particular gene along all lineages
plotSmoothers-method	Plot the log-transformed counts and the fitted values for a particular gene along all lineages
sce	A SingleCellExperiment object, used for testing.