getModel | Returns the Progeny Model |
model_human_full | The full human linear model underlying PROGENy |
model_mouse_full | The full mouse linear model underlying PROGENy |
progeny | Calculate PROGENy pathway scores from gene expression |
progenyPerm | Compute progeny pathway scores and assesses significance based on permutations |
progenyScatter | Calculate Progeny Scores with Permutations |
saveProgenyPlots | Function to save Progeny plots |
vignette_data | The RNA data used in the progeny vignette |