Open Cancer TherApeutic Discovery (OCTAD)
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Documentation for package ‘octad’ version 1.8.0
Help Pages
| computeCellLine | Compute Correlation between cell lines and vector of case ids. |
| computeRefTissue | Compute correlating reference control samples. |
| diffExp | Compute differential expression |
| loadOctadCounts | Load octad expression data |
| octad | Open Cancer TherApeutic Discovery (OCTAD) database package |
| octadDrugEnrichment | Compute Drug enrichment |
| res_example | Differential expression example for HCC vs adjacent liver tissue computed in diffExp() function |
| runsRGES | Compute sRGES |
| sRGES_example | Data of computed example sRGEs for HCC vs liver adjacent tissues on octad.small dataset |
| topLineEval | Evaluate cell lines |