$,matter_list-method	matter_list-class
$<-,matter_list-method	matter_list-class
%*%,matrix,matter_mat-method	matter_arr-class
%*%,matrix,sparse_mat-method	sparse_arr-class
%*%,matter_mat,matrix-method	matter_arr-class
%*%,matter_mat,vector-method	matter_arr-class
%*%,sparse_mat,matrix-method	sparse_arr-class
%*%,sparse_mat,vector-method	sparse_arr-class
%*%,vector,matter_mat-method	matter_arr-class
%*%,vector,sparse_mat-method	sparse_arr-class
.colStats	rowStats
.rowStats	rowStats
adata	matter-class
adata,matter-method	matter-class
add_alpha	cpal
add_facets	vizi-functions
add_mark	vizi-functions
aindex	sparse_arr-class
aindex,sparse_arr-method	sparse_arr-class
all,matter_arr-method	summary-stats
any,matter_arr-method	summary-stats
approx1	approx1
approx2	approx2
Arith	deferred-ops
Arith,array,matter_arr-method	deferred-ops
Arith,array,sparse_arr-method	deferred-ops
Arith,matter_arr,array-method	deferred-ops
Arith,matter_arr,vector-method	deferred-ops
Arith,sparse_arr,array-method	deferred-ops
Arith,sparse_arr,vector-method	deferred-ops
Arith,vector,matter_arr-method	deferred-ops
Arith,vector,sparse_arr-method	deferred-ops
array_ind	matter-utils
as.altrep	matter-utils
as.altrep,matter_arr-method	matter-utils
as.altrep,matter_fct-method	matter-utils
as.altrep,matter_list-method	matter-utils
as.altrep,matter_mat-method	matter-utils
as.altrep,matter_str-method	matter-utils
as.altrep,matter_vec-method	matter-utils
as.array,matter_arr-method	matter_arr-class
as.array,sparse_arr-method	sparse_arr-class
as.character,matter_str-method	matter_str-class
as.data.frame,atoms-method	matter-class
as.data.frame,drle-method	drle-class
as.data.frame,stream_stat-method	stream-stats
as.factor,drle_fct-method	drle-class
as.factor,matter_fct-method	matter_fct-class
as.integer,drle-method	drle-class
as.integer,matter_arr-method	matter_arr-class
as.integer,sparse_arr-method	sparse_arr-class
as.list,atoms-method	matter-class
as.list,chunked-method	chunked-class
as.list,drle-method	drle-class
as.list,matter_list-method	matter_list-class
as.logical,matter_arr-method	matter_arr-class
as.logical,sparse_arr-method	sparse_arr-class
as.matrix,matter_arr-method	matter_arr-class
as.matrix,sparse_arr-method	sparse_arr-class
as.matter	matter-class
as.numeric,drle-method	drle-class
as.numeric,matter_arr-method	matter_arr-class
as.numeric,sparse_arr-method	sparse_arr-class
as.raw,matter_arr-method	matter_arr-class
as.raw,sparse_arr-method	sparse_arr-class
as.sparse	sparse_arr-class
as.vector,drle-method	drle-class
as.vector,matter_arr-method	matter_arr-class
as.vector,matter_str-method	matter_str-class
as.vector,sparse_arr-method	sparse_arr-class
asearch	asearch
as_facets	vizi-functions
atomdata	matter-class
atomdata,matter-method	matter-class
atomdata,sparse_arr-method	sparse_arr-class
atomdata<-	matter-class
atomdata<-,matter-method	matter-class
atomindex	sparse_arr-class
atomindex,sparse_arr-method	sparse_arr-class
atomindex<-	sparse_arr-class
atomindex<-,sparse_arr-method	sparse_arr-class
atoms	matter-class
atoms-class	matter-class
avg	matter-utils
binpeaks	binpeaks
binvec	binvec
bsearch	bsearch
c,atoms-method	matter-class
c,drle-method	drle-class
c,matter-method	matter-class
c,matter_arr-method	matter_arr-class
c,matter_list-method	matter_list-class
c,matter_str-method	matter_str-class
c,vizi_facets-method	vizi-functions
c,vizi_plot-method	vizi-functions
cbind2,atoms,ANY-method	matter-class
cbind2,matter_mat,matter_mat-method	matter_arr-class
cbind2,matter_mat,matter_vec-method	matter_arr-class
cbind2,matter_vec,matter_mat-method	matter_arr-class
cbind2,matter_vec,matter_vec-method	matter_arr-class
cbind2,sparse_mat,sparse_mat-method	sparse_arr-class
checksum	checksum
checksum,atoms-method	checksum
checksum,character-method	checksum
checksum,matter_-method	checksum
chunkApply	chunkApply
chunked	chunked-class
chunked-class	chunked-class
chunked_arr	chunked-class
chunked_arr-class	chunked-class
chunked_list	chunked-class
chunked_list-class	chunked-class
chunked_mat	chunked-class
chunked_mat-class	chunked-class
chunked_vec	chunked-class
chunked_vec-class	chunked-class
chunkify	chunked-class
chunkLapply	chunkApply
chunkMapply	chunkApply
chunk_apply	chunkApply
chunk_colapply	chunkApply
chunk_lapply	chunkApply
chunk_mapply	chunkApply
chunk_rowapply	chunkApply
chunk_writer	chunkApply
class:atoms	matter-class
class:chunked	chunked-class
class:chunked_arr	chunked-class
class:chunked_list	chunked-class
class:chunked_mat	chunked-class
class:chunked_vec	chunked-class
class:drle	drle-class
class:drle_fct	drle-class
class:matter	matter-class
class:matter_arr	matter_arr-class
class:matter_fct	matter_fct-class
class:matter_list	matter_list-class
class:matter_mat	matter_arr-class
class:matter_str	matter_str-class
class:matter_vec	matter_arr-class
class:sparse_arr	sparse_arr-class
class:sparse_mat	sparse_arr-class
class:sparse_vec	sparse_arr-class
coef.opls	pls
coldist	rowDists
colDistFun	fastmap
colDists	rowDists
colDists,ANY,missing-method	rowDists
colDists,matrix,matrix-method	rowDists
colDists,matrix,matter_mat-method	rowDists
colDists,matrix,sparse_mat-method	rowDists
colDists,matter_mat,matrix-method	rowDists
colDists,sparse_mat,matrix-method	rowDists
coldist_at	rowDists
colMeans	summary-stats
colMeans,matter_mat-method	summary-stats
colMeans,sparse_mat-method	summary-stats
colscale	colscale
colscale,ANY-method	colscale
colStats	rowStats
colStats,ANY-method	rowStats
colStats,matter_mat-method	rowStats
colStats,sparse_mat-method	rowStats
colSums	summary-stats
colSums,matter_mat-method	summary-stats
colSums,sparse_mat-method	summary-stats
colsweep	colsweep
colsweep,ANY-method	colsweep
colsweep,matter_mat-method	colsweep
colsweep,sparse_mat-method	colsweep
combine,ANY,ANY-method	matter-utils
combine,atoms,ANY-method	matter-class
combine,drle,drle-method	drle-class
combine,drle,numeric-method	drle-class
combine,drle_fct,drle_fct-method	drle-class
combine,matter_arr,ANY-method	matter_arr-class
combine,matter_fct,ANY-method	matter_fct-class
combine,matter_list,ANY-method	matter_list-class
combine,matter_str,ANY-method	matter_str-class
combine,numeric,drle-method	drle-class
combine,stream_stat,ANY-method	stream-stats
combine,vizi_facets,vizi_facets-method	vizi-functions
combine,vizi_plot,vizi_plot-method	vizi-functions
Compare	deferred-ops
convolve_at	convolve_at
coscore	coscore
cpal	cpal
crossprod,ANY,matter_mat-method	matter_arr-class
crossprod,ANY,sparse_mat-method	sparse_arr-class
crossprod,matter_mat,ANY-method	matter_arr-class
crossprod,sparse_mat,ANY-method	sparse_arr-class
cv_do	cv_do
cwt	findpeaks_cwt
describe_for_display	matter-utils
describe_for_display,ANY-method	matter-utils
describe_for_display,atoms-method	matter-utils
describe_for_display,chunked-method	chunked-class
describe_for_display,drle-method	matter-utils
describe_for_display,drle_fct-method	matter-utils
describe_for_display,matter_arr-method	matter-utils
describe_for_display,matter_fct-method	matter-utils
describe_for_display,matter_list-method	matter-utils
describe_for_display,matter_mat-method	matter-utils
describe_for_display,matter_str-method	matter-utils
describe_for_display,matter_vec-method	matter-utils
describe_for_display,sparse_mat-method	matter-utils
describe_for_display,sparse_vec-method	matter-utils
dim,atoms-method	matter-class
dim,matter-method	matter-class
dim,matter_list-method	matter_list-class
dim,matter_str-method	matter_str-class
dim,matter_vec-method	matter_arr-class
dim,sparse_vec-method	sparse_arr-class
dim<-,matter-method	matter-class
dim<-,matter_arr-method	matter_arr-class
dim<-,matter_vec-method	matter_arr-class
dimnames,matter-method	matter-class
dimnames<-,matter,ANY-method	matter-class
dims,atoms-method	matter-class
domain	sparse_arr-class
domain,array-method	sparse_arr-class
domain,sparse_arr-method	sparse_arr-class
domain,vector-method	sparse_arr-class
domain<-	sparse_arr-class
domain<-,array-method	sparse_arr-class
domain<-,sparse_arr-method	sparse_arr-class
domain<-,vector-method	sparse_arr-class
downsample	downsample
dpal	cpal
drle	drle-class
drle-class	drle-class
drle_fct	drle-class
drle_fct-class	drle-class
droplevels,drle_fct-method	drle-class
Encoding,matter_str-method	matter_str-class
Encoding<-,matter_str-method	matter_str-class
enhance	enhance
enhance_adapt	enhance
enhance_adj	enhance
enhance_hist	enhance
estbase	estbase
estbase_hull	estbase
estbase_loc	estbase
estbase_med	estbase
estbase_snip	estbase
estdim	estdim
estnoise	estnoise
estnoise_diff	estnoise
estnoise_filt	estnoise
estnoise_mad	estnoise
estnoise_quant	estnoise
estnoise_sd	estnoise
estres	estres
eval_at	matter-utils
eval_exprs	matter-utils
exp,matter_arr-method	matter_arr-class
exp,sparse_arr-method	sparse_arr-class
fastmap	fastmap
filt1	filt1
filt1_adapt	filt1
filt1_bi	filt1
filt1_conv	filt1
filt1_diff	filt1
filt1_gauss	filt1
filt1_guide	filt1
filt1_ma	filt1
filt1_pag	filt1
filt1_sg	filt1
filt2	filt2
filt2_adapt	filt2
filt2_bi	filt2
filt2_conv	filt2
filt2_diff	filt2
filt2_gauss	filt2
filt2_guide	filt2
filt2_ma	filt2
findbins	downsample
findpeaks	findpeaks
findpeaks_cwt	findpeaks_cwt
findridges	findpeaks_cwt
fitted.cv	cv_do
fitted.nscentroids	nscentroids
fitted.opls	pls
fitted.pls	pls
fitted.sgmix	sgmix
getRNGStream	RNGStreams
hex2raw	uuid
icor	warp1
inpoly	inpoly
is.drle	drle-class
is.matter	matter-class
is.sparse	sparse_arr-class
is_gridded	to_raster
kdsearch	knnsearch
kdtree	knnsearch
keys	matter-utils
keys,ANY-method	matter-utils
keys<-	matter-utils
keys<-,ANY-method	matter-utils
knnsearch	knnsearch
length,atoms-method	matter-class
length,chunked-method	chunked-class
length,drle-method	drle-class
length,matter-method	matter-class
length,matter_list-method	matter_list-class
length,matter_str-method	matter_str-class
length,sparse_arr-method	sparse_arr-class
length<-,matter-method	matter-class
lengths,atoms-method	matter-class
lengths,chunked-method	chunked-class
lengths,matter_list-method	matter_list-class
lengths,matter_str-method	matter_str-class
lengths,sparse_arr-method	sparse_arr-class
levels,drle_fct-method	drle-class
levels,matter_fct-method	matter_fct-class
levels<-,drle_fct-method	drle-class
levels<-,matter_fct-method	matter_fct-class
linear_ind	matter-utils
locmax	findpeaks
locmin	findpeaks
log,matter_arr-method	matter_arr-class
log,sparse_arr-method	sparse_arr-class
log10,matter_arr-method	matter_arr-class
log10,sparse_arr-method	sparse_arr-class
log1p,matter_arr-method	matter_arr-class
log1p,sparse_arr-method	sparse_arr-class
log2,matter_arr-method	matter_arr-class
log2,sparse_arr-method	sparse_arr-class
Logic	deferred-ops
logLik.nscentroids	nscentroids
logLik.sgmix	sgmix
logLik.sgmixn	sgmix
matter	matter-class
matter-class	matter-class
matter-options	matter-options
matter-types	matter-types
matter-utils	matter-utils
matter_arr	matter_arr-class
matter_arr-class	matter_arr-class
matter_fct	matter_fct-class
matter_fct-class	matter_fct-class
matter_list	matter_list-class
matter_list-class	matter_list-class
matter_mat	matter_arr-class
matter_mat-class	matter_arr-class
matter_str	matter_str-class
matter_str-class	matter_str-class
matter_vec	matter_arr-class
matter_vec-class	matter_arr-class
max,matter_arr-method	summary-stats
mean,matter_arr-method	summary-stats
mem	mem
memtime	mem
mergepeaks	binpeaks
mi	warp2
min,matter_arr-method	summary-stats
mi_learn	mi_learn
mtime	mem
names,matter-method	matter-class
names<-,matter-method	matter-class
nndsvd	nnmf
nnmf	nnmf
nnmf_als	nnmf
nnmf_mult	nnmf
nnpairs	knnsearch
nnzero,sparse_arr-method	sparse_arr-class
nscentroids	nscentroids
opls	pls
opls_nipals	pls
Ops	deferred-ops
panel_dim	matter-utils
panel_get	matter-utils
panel_grid	matter-utils
panel_next	matter-utils
panel_prev	matter-utils
panel_set	matter-utils
parse_formula	matter-utils
path	matter-class
path,atoms-method	matter-class
path,matter_-method	matter-class
path<-	matter-class
path<-,atoms-method	matter-class
path<-,matter_-method	matter-class
peakareas	peakwidths
peakheights	peakwidths
peakwidths	peakwidths
pinv	matter-utils
plot,vizi_bars,ANY-method	vizi-methods
plot,vizi_boxplot,ANY-method	vizi-methods
plot,vizi_colorkey,ANY-method	vizi-functions
plot,vizi_facets,ANY-method	vizi-functions
plot,vizi_image,ANY-method	vizi-methods
plot,vizi_intervals,ANY-method	vizi-methods
plot,vizi_key,ANY-method	vizi-functions
plot,vizi_lines,ANY-method	vizi-methods
plot,vizi_peaks,ANY-method	vizi-methods
plot,vizi_pixels,ANY-method	vizi-methods
plot,vizi_plot,ANY-method	vizi-functions
plot,vizi_points,ANY-method	vizi-methods
plot,vizi_rules,ANY-method	vizi-methods
plot,vizi_text,ANY-method	vizi-methods
plot,vizi_voxels,ANY-method	vizi-methods
plot.vizi_bars	vizi-methods
plot.vizi_boxplot	vizi-methods
plot.vizi_image	vizi-methods
plot.vizi_intervals	vizi-methods
plot.vizi_lines	vizi-methods
plot.vizi_peaks	vizi-methods
plot.vizi_pixels	vizi-methods
plot.vizi_points	vizi-methods
plot.vizi_rules	vizi-methods
plot.vizi_text	vizi-methods
plot.vizi_voxels	vizi-methods
plot_image	plot_signal
plot_signal	plot_signal
pls	pls
pls_kernel	pls
pls_nipals	pls
pls_simpls	pls
pointers	sparse_arr-class
pointers,sparse_arr-method	sparse_arr-class
pointers<-	sparse_arr-class
pointers<-,sparse_arr-method	sparse_arr-class
prcomp	prcomp
prcomp,matter_mat-method	prcomp
prcomp,sparse_mat-method	prcomp
prcomp_lanczos	prcomp
predict.fastmap	fastmap
predict.nnmf	nnmf
predict.nscentroids	nscentroids
predict.opls	pls
predict.pls	pls
predscore	predscore
preplot,vizi_facets-method	vizi-functions
preplot,vizi_plot-method	vizi-functions
preview_for_display	matter-utils
preview_for_display,ANY-method	matter-utils
preview_for_display,atoms-method	matter-utils
preview_for_display,chunked-method	chunked-class
preview_for_display,drle-method	matter-utils
preview_for_display,matter_arr-method	matter-utils
preview_for_display,matter_fct-method	matter-utils
preview_for_display,matter_list-method	matter-utils
preview_for_display,matter_mat-method	matter-utils
preview_for_display,matter_str-method	matter-utils
preview_for_display,matter_vec-method	matter-utils
preview_for_display,sparse_mat-method	matter-utils
preview_for_display,sparse_vec-method	matter-utils
print,vizi_facets,ANY-method	vizi-functions
print,vizi_plot,ANY-method	vizi-functions
prod,matter_arr-method	summary-stats
profmem	mem
qmad	matter-utils
qmedian	matter-utils
qorder	matter-utils
qrank	matter-utils
qselect	matter-utils
range,matter_arr-method	summary-stats
raw2hex	uuid
rbind2,atoms,ANY-method	matter-class
rbind2,matter_mat,matter_mat-method	matter_arr-class
rbind2,matter_mat,matter_vec-method	matter_arr-class
rbind2,matter_vec,matter_mat-method	matter_arr-class
rbind2,matter_vec,matter_vec-method	matter_arr-class
rbind2,sparse_mat,sparse_mat-method	sparse_arr-class
readonly	matter-class
readonly,atoms-method	matter-class
readonly,matter_-method	matter-class
readonly<-	matter-class
readonly<-,atoms-method	matter-class
readonly<-,matter_-method	matter-class
read_atom	matter-utils
read_atoms	matter-utils
reldiff	bsearch
rescale	rescale
rescale_iqr	rescale
rescale_range	rescale
rescale_ref	rescale
rescale_rms	rescale
rescale_sum	rescale
residuals.opls	pls
ricker	findpeaks_cwt
RNGStreams	RNGStreams
rocscore	rocscore
roll	matter-utils
rollvec	rollvec
rowdist	rowDists
rowDistFun	fastmap
rowDists	rowDists
rowDists,ANY,missing-method	rowDists
rowDists,matrix,matrix-method	rowDists
rowDists,matrix,matter_mat-method	rowDists
rowDists,matrix,sparse_mat-method	rowDists
rowDists,matter_mat,matrix-method	rowDists
rowDists,sparse_mat,matrix-method	rowDists
rowdist_at	rowDists
rowMaj	matter_arr-class
rowMaj,Matrix-method	matter_arr-class
rowMaj,matrix-method	matter_arr-class
rowMaj,matter_arr-method	matter_arr-class
rowMaj,sparse_arr-method	sparse_arr-class
rowMeans	summary-stats
rowMeans,matter_mat-method	summary-stats
rowMeans,sparse_mat-method	summary-stats
rowscale	colscale
rowscale,ANY-method	colscale
rowStats	rowStats
rowStats,ANY-method	rowStats
rowStats,matter_mat-method	rowStats
rowStats,sparse_mat-method	rowStats
rowSums	summary-stats
rowSums,matter_mat-method	summary-stats
rowSums,sparse_mat-method	summary-stats
rowsweep	colsweep
rowsweep,ANY-method	colsweep
rowsweep,matter_mat-method	colsweep
rowsweep,sparse_mat-method	colsweep
sampler	sparse_arr-class
sampler,sparse_arr-method	sparse_arr-class
sampler<-	sparse_arr-class
sampler<-,sparse_arr-method	sparse_arr-class
sd,matter_arr-method	summary-stats
seq_rel	matter-utils
setRNGStream	RNGStreams
set_channel	vizi-functions
set_coord	vizi-functions
set_engine	vizi-functions
set_par	vizi-functions
set_title	vizi-functions
sgmix	sgmix
sgmixn	sgmix
shingles	matter-utils
simspec	simspec
simspec1	simspec
sizeof	matter-utils
size_bytes	matter-utils
sparse_arr	sparse_arr-class
sparse_arr-class	sparse_arr-class
sparse_mat	sparse_arr-class
sparse_mat-class	sparse_arr-class
sparse_vec	sparse_arr-class
sparse_vec-class	sparse_arr-class
stat_c	stream-stats
stream_stat	stream-stats
struct	struct
sum,matter_arr-method	summary-stats
Summary	summary-stats
s_all	stream-stats
s_any	stream-stats
s_colstats	stream-stats
s_max	stream-stats
s_mean	stream-stats
s_min	stream-stats
s_nnzero	stream-stats
s_prod	stream-stats
s_range	stream-stats
s_rowstats	stream-stats
s_sd	stream-stats
s_stat	stream-stats
s_sum	stream-stats
s_var	stream-stats
t,matter_arr-method	matter_arr-class
t,matter_vec-method	matter_arr-class
t,sparse_arr-method	sparse_arr-class
t,sparse_vec-method	sparse_arr-class
tcrossprod,ANY,matter_mat-method	matter_arr-class
tcrossprod,ANY,sparse_mat-method	sparse_arr-class
tcrossprod,matter_mat,ANY-method	matter_arr-class
tcrossprod,sparse_mat,ANY-method	sparse_arr-class
tolerance,sparse_arr-method	sparse_arr-class
tolerance<-	sparse_arr-class
tolerance<-,sparse_arr-method	sparse_arr-class
to_raster	to_raster
to_raster3	to_raster
trans2d	trans2d
type	matter-class
type,array-method	matter-utils
type,atoms-method	matter-class
type,drle-method	drle-class
type,matter-method	matter-class
type,vector-method	matter-utils
type<-	matter-class
type<-,atoms-method	matter-class
type<-,matter-method	matter-class
types	matter-types
uuid	uuid
var,matter_arr-method	summary-stats
vip	pls
vizi	vizi-functions
vizi_bars	vizi-methods
vizi_boxplot	vizi-methods
vizi_engine	vizi-par
vizi_image	vizi-methods
vizi_intervals	vizi-methods
vizi_lines	vizi-methods
vizi_par	vizi-par
vizi_peaks	vizi-methods
vizi_pixels	vizi-methods
vizi_points	vizi-methods
vizi_rules	vizi-methods
vizi_style	vizi-par
vizi_text	vizi-methods
vizi_voxels	vizi-methods
vm_used	matter-utils
vm_used,ANY-method	matter-utils
vm_used,atoms-method	matter-utils
vm_used,matter_-method	matter-utils
vm_used,sparse_arr-method	matter-utils
warp1	warp1
warp1_cow	warp1
warp1_dtw	warp1
warp1_loc	warp1
warp2	warp2
warp2_trans	warp2
write_atom	matter-utils
write_atoms	matter-utils
[,atoms,ANY,ANY,ANY-method	matter-class
[,atoms-method	matter-class
[,chunked,ANY,ANY,ANY-method	chunked-class
[,drle,ANY,ANY,ANY-method	drle-class
[,drle_fct,ANY,ANY,ANY-method	drle-class
[,matter_arr,ANY,ANY,ANY-method	matter_arr-class
[,matter_arr-method	matter_arr-class
[,matter_fct,ANY,ANY,ANY-method	matter_fct-class
[,matter_fct-method	matter_fct-class
[,matter_list,ANY,ANY,ANY-method	matter_list-class
[,matter_list-method	matter_list-class
[,matter_mat,ANY,ANY,ANY-method	matter_arr-class
[,matter_mat-method	matter_arr-class
[,matter_str,ANY,ANY,ANY-method	matter_str-class
[,matter_str-method	matter_str-class
[,sparse_arr,ANY,ANY,ANY-method	sparse_arr-class
[<-,matter_arr,ANY,ANY,ANY-method	matter_arr-class
[<-,matter_arr-method	matter_arr-class
[<-,matter_fct,ANY,ANY,ANY-method	matter_fct-class
[<-,matter_fct-method	matter_fct-class
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