Tools for processing of high-dimensional cytometry data


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Documentation for package ‘flowSpecs’ version 1.19.0

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flowSpecs-package Tools for processing high-dimensional cytometry files
arcTrans Efficient inverse hyperbolic cosine transformation
correctUnmix Correct defects in spectral unmixing by compensation
corrMatCreate Generate a correction matrix for cytometry data analysis
flowSet2LongDf Convert a flowSet to one long dataframe with all identifiers as separate #columns.
flowSpecs Tools for processing high-dimensional cytometry files
fullPanel A fully stained spectral cytometry sample
oneVsAllPlot Plotting all variables against a single variable
peakNorm Normalize batch differences in intensities by aligning peaks
specMat Spectral unmixing matrix
specMatCalc Calculating the matrix used for spectral unmixing
specUnmix Spectral unmixing of cytometry files
unmixCtrls Unmixing controls