Package to Draw Protein Schematics from Uniprot API output

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Documentation for package ‘drawProteins’ version 1.25.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

drawProteins	drawProteins.
draw_canvas	Create ggplot2 object with protein chains from feature database
draw_chains	Create ggplot2 object with protein chains from feature database
draw_domains	Add protein domains to ggplot2 object.
draw_folding	Add regions to ggplot object: alpha-helixes, beta-strands and turns.
draw_motif	Add protein motifs sites to ggplot2 object.
draw_phospho	Add protein phosphorylation sites to ggplot2 object.
draw_recept_dom	Add receptor domains to ggplot2 object.
draw_regions	Add protein region sites to ggplot2 object.
draw_repeat	Add protein repeats sites to ggplot2 object.
extract_feat_acc	Create a dataframe of protein features from JSON object (List of 6)
extract_names	Extract protein names into a list
extract_transcripts	Create a new dataframe of protein features from dataframe with multiple transcripts separated so that each transcript is drawn separtely with only the appropriate features.
feature_to_dataframe	Create a dataframe of protein features from JSON object
five_rel_data	Dataframe features of 5 human NFkappaB proteins Uniprot on 1 Nov 2017
five_rel_list	Features of five human Rel A proteins
get_features	GET features of protein(s) from UniProt API
parse_gff	Reformat file or url in gff format to allow to draw
phospho_site_info	Create a dataframe of protein features from JSON object
protein_json	Uniprot infor human Rel A protein in JSON format
rel_A_features	Features of human Rel A protein
rel_json	Human Rel A protein features in JSON format
tnfs_data	Dataframe features of 2 human TNF receptors from Uniprot on 3 Jan 2018