Identifies cell population in flow cytometry data

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Documentation for package ‘SamSPECTRAL’ version 1.60.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

SamSPECTRAL-package	Identifying cell populations in flow cytometry data.
Building_Communities	Builds the communities from the set of all data points.
check.SamSPECTRAL.input	Checks the input to SamSPECTRAL.
Civilized_Spectral_Clustering	Runs the spectral clustering algorithm on the sample points.
ClusteringResult	Runs the spectral clustering algorithm on the sample points.
ClusteringResult-class	Runs the spectral clustering algorithm on the sample points.
Conductance_Calculation	Computes the conductance between communities.
Connecting	Combines the spectral clusters to build the connected components.
eigen.values.10	Eigenvalues for building the SamSPECTRAL vignette.
eigen.values.1000	Eigenvalues for building the SamSPECTRAL vignette.
kneepointDetection	Fits 2 regression lines to data to estimate the knee (or elbow) point.
SamSPECTRAL	Identifies the cell populations in flow cytometry data.
small	Flow cytometry data to test SamSPECTRAL algorithm.
stmFSC	Flow cytometry data to test SamSPECTRAL algorithm.