Remove Unwanted Variation from RNA-Seq Data

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Documentation for package ‘RUVSeq’ version 1.39.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

RUVSeq-package	Remove Unwanted Variation from RNA-Seq Data
makeGroups	Make a matrix suitable for use with RUVSeq methods such as 'RUVs'.
residuals.DGEGLM	Deviance and Pearson Residuals for the Negative Binomial Model of 'edgeR'
RUVg	Remove Unwanted Variation Using Control Genes
RUVg-method	Remove Unwanted Variation Using Control Genes
RUVg-methods	Remove Unwanted Variation Using Control Genes
RUVr	Remove Unwanted Variation Using Residuals
RUVr-method	Remove Unwanted Variation Using Residuals
RUVr-methods	Remove Unwanted Variation Using Residuals
RUVs	Remove Unwanted Variation Using Replicate/Negative Control Samples
RUVs-method	Remove Unwanted Variation Using Replicate/Negative Control Samples
RUVs-methods	Remove Unwanted Variation Using Replicate/Negative Control Samples
RUVSeq	Remove Unwanted Variation from RNA-Seq Data