Linear Model Toolset for Gene Set Enrichment Analysis

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Documentation for package ‘GSEAlm’ version 1.66.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

CooksDPerGene	Linear-Model Deletion Diagnostics for Gene Expression (or similar) Data Structures
dfbetasPerGene	Linear-Model Deletion Diagnostics for Gene Expression (or similar) Data Structures
dffitsPerGene	Linear-Model Deletion Diagnostics for Gene Expression (or similar) Data Structures
getResidPerGene	Row-by-Row Linear-Model Residuals for Gene Expression (or similar) Data Structures
gsealmPerm	Nonparametric inference for linear models in Gene-Set-Enrichment Analysis (GSEA)
GSNormalize	Aggregating and calculating expression statistics by Gene Set
identity	Aggregating and calculating expression statistics by Gene Set
Leverage	Linear-Model Deletion Diagnostics for Gene Expression (or similar) Data Structures
lmPerGene	Fit linear model for each gene
mnDiffPlot	Simple Graphical Summaries for Gene Set Enrichment Analysis (GSEA)
one	Aggregating and calculating expression statistics by Gene Set
resplot	Simple Graphical Summaries for Gene Set Enrichment Analysis (GSEA)
restrip	Simple Graphical Summaries for Gene Set Enrichment Analysis (GSEA)