Interactive Workflow for Discovering Rhythmicity in Biological
Data
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Documentation for package ‘DiscoRhythm’ version 1.21.0
Help Pages
| discoApp | Launch the DiscoRhythm Shiny Application |
| discoBatch | Core DiscoRhythm Workflow |
| discoCheckInput | Import Data for DiscoRhythm Analysis |
| discoDesignSummary | Summarize the experimental design |
| discoDFtoSE | Data formatting for DiscoRhythm |
| discoGetODAs | Execute Oscillation Detection Using DiscoRhythm |
| discoGetSimu | Read in the DiscoRhythm Simulated dataset |
| discoInterCorOutliers | Quality Control for DiscoRhythm |
| discoODAexclusionMatrix | Algorithm Exclusion Matrix |
| discoODAid2name | Mapping Identifiers to Full Names |
| discoODAs | Execute Oscillation Detection Using DiscoRhythm |
| discoParseMeta | Generate Experiment Metadata |
| discoPCA | Perform PCA |
| discoPCAoutliers | Quality Control for DiscoRhythm |
| discoPeriodDetection | Detect dataset-wide fits to multiple periodicities |
| discoQC | Quality Control for DiscoRhythm |
| discoRepAnalysis | Quality Control for DiscoRhythm |
| discoSEtoDF | Data formatting for DiscoRhythm |