To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")

In most cases, you don't need to download the package archive at all.

minionSummaryData

   

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see minionSummaryData.

Summarised MinION sequencing data published by Ashton et al. 2015

Bioconductor version: 3.2

Summarised MinION sequencing data for Salmonella Typhi published by Ashton et al. in 2015. Three replicate runs are each provided as Fast5Summary objects.

Author: Mike Smith [aut, cre]

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("minionSummaryData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("minionSummaryData")

 

HTML Creating example MinION summary dataset
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews ExperimentData, SequencingData
Version 1.0.0
License MIT + file LICENSE
Depends R (>= 3.2.0)
Imports
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me IONiseR
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source minionSummaryData_1.0.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/minionSummaryData/
Package Downloads Report Download Stats

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