To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("metaMS")

In most cases, you don't need to download the package archive at all.

metaMS

   

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see metaMS.

MS-based metabolomics annotation pipeline

Bioconductor version: 3.2

MS-based metabolomics data processing and compound annotation pipeline.

Author: Ron Wehrens [aut, cre] (author of GC-MS part), Pietro Franceschi [aut] (author of LC-MS part), Nir Shahaf [ctb], Matthias Scholz [ctb], Georg Weingart [ctb] (development of GC-MS approach), Elisabete Carvalho [ctb] (testing and feedback of GC-MS pipeline)

Maintainer: Ron Wehrens <ron.wehrens at gmail.com>

Citation (from within R, enter citation("metaMS")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("metaMS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metaMS")

 

PDF runGC
PDF runLC
PDF   Reference Manual
Text   NEWS

Details

biocViews MassSpectrometry, Metabolomics, Software
Version 1.6.0
In Bioconductor since BioC 2.14 (R-3.1) (2 years)
License GPL (>= 2)
Depends R (>= 2.10), methods, CAMERA, xcms(>= 1.35)
Imports Matrix, tools, robustbase, BiocGenerics
LinkingTo
Suggests metaMSdata, RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source metaMS_1.6.0.tar.gz
Windows Binary metaMS_1.6.0.zip
Mac OS X 10.6 (Snow Leopard) metaMS_1.6.0.tgz
Mac OS X 10.9 (Mavericks) metaMS_1.6.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/metaMS/tree/release-3.2
Package Short Url http://bioconductor.org/packages/metaMS/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center