To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dupRadar")

In most cases, you don't need to download the package archive at all.

dupRadar

   

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see dupRadar.

Assessment of duplication rates in RNA-Seq datasets

Bioconductor version: 3.2

Duplication rate quality control for RNA-Seq datasets.

Author: Sergi Sayols <sergisayolspuig at gmail.com>, Holger Klein <holger.klein at gmail.com>

Maintainer: Sergi Sayols <sergisayolspuig at gmail.com>, Holger Klein <holger.klein at gmail.com>

Citation (from within R, enter citation("dupRadar")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dupRadar")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dupRadar")

 

HTML Using the dupRadar package
PDF   Reference Manual
Text   NEWS

Details

biocViews QualityControl, RNASeq, Sequencing, Software, Technology
Version 1.0.0
In Bioconductor since BioC 3.2 (R-3.2) (0.5 years)
License GPL-3
Depends R (>= 3.2.0)
Imports Rsubread(>= 1.14.1)
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, AnnotationHub
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source dupRadar_1.0.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard) dupRadar_1.0.0.tgz
Mac OS X 10.9 (Mavericks) dupRadar_1.0.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/dupRadar/tree/release-3.2
Package Short Url http://bioconductor.org/packages/dupRadar/
Package Downloads Report Download Stats

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