Mirsynergy


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Documentation for package ‘Mirsynergy’ version 1.6.0

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Mirsynergy-package Mirsynergy: detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion.
Mirsynergy Mirsynergy: detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion.
mirsynergy Detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion
plot_modules Plot module assignments.
plot_module_summary Plot module statistics
print_modules2 Print basic information of the formed modules
summary_modules Return summary information of the formed modules
tabular_module Generate tabulated module assignments and nodes for input to Cystoscape.
tcga_brca_testdata Breast cancer expression test data from TCGA
toy_modules Test data of 20 mRNA and 20 miRNA.