IVAS-package | IVAS : Identification of genomic variants affecting Alternative Splicing |
calSignificant | Calculates P.values by using two statistical models. |
chrseparate | Separate a TranscriptDb object based on a chromosome. |
findAlternative | Find alternative exons of a gene. |
findOversnp | Find SNPs which belongs to alternative exons and flanking introns of them. |
IVAS | IVAS : Identification of genomic variants affecting Alternative Splicing |
MsqtlFinder | Find SQTLs in multiple genes. |
sampleexp | CEU expression data |
samplesnp | CEU genotype data |
samplesnplocus | snplocus |
saveBplot | Save boxplots |
sqtlfinder | Find SQTLs. |