AggregateFlowFrames | Aggregate multiple fcs files together |
BuildMST | Build Minimal Spanning Tree |
BuildSOM | Build a self-organizing map |
CountGroups | Compute differences between groups |
FlowSOM | Run the FlowSOM algorithm |
FlowSOMSubset | FlowSOM subset |
FMeasure | FMeasure of a clustering result |
MetaClustering | MetaClustering |
metaClustering_consensus | MetaClustering |
NewData | Map new data to a FlowSOM grid |
PlotCenters | Plot cluster centers on a 2D plot |
PlotClusters2D | Plot nodes on scatter plot |
PlotGroups | Plot differences between groups |
PlotMarker | Plot marker values |
PlotPies | Plot comparison with other clustering |
PlotStars | Plot star charts |
Purity | Purity of a clustering result |
ReadInput | Read fcs-files or flowframes |
UpdateNodeSize | Update nodesize of FlowSOM object |