Package: IPPD
Title: Isotopic peak pattern deconvolution for Protein Mass
        Spectrometry by template matching
Version: 1.18.0
Date: 2014-07-24
Author: Martin Slawski <ms@cs.uni-saarland.de>, Rene Hussong <rene.hussong@uni.lu>, Andreas Hildebrandt <andreas.hildebrandt@uni-mainz.de>, Matthias Hein <hein@cs.uni-saarland.de>
Maintainer: Martin Slawski <ms@cs.uni-saarland.de>
Depends: R (>= 2.12.0), MASS, Matrix, XML, digest, bitops
Imports: methods, stats, graphics
Description: The package provides functionality to extract isotopic peak
  patterns from raw mass spectra. This is done by fitting a large set of
  template basis functions to the raw spectrum using either nonnegative least
  squares or least absolute deviation fittting. The
  package offers a flexible function which
  tries to estimate model parameters in a way tailored to the peak shapes in
  the data. The package also provides functionality to process LCMS runs.
License: GPL (version 2 or later)
Collate: classes.R methods.R getPeaklist.R fitModelParameters.R
        internals.R analyzeLCMS.R read.mzXML.R sweepline.R
biocViews: Proteomics
Packaged: 2015-10-15 01:32:18 UTC; biocbuild
NeedsCompilation: yes
Built: R 3.2.2; x86_64-apple-darwin10.8.0; 2015-10-15 17:05:35 UTC; unix
