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TWGBS and RNA-seq data from tissue T regulatory cells from mice

Bioconductor version: Release (3.19)

The package provides ready to use epigenomes (obtained from TWGBS) and transcriptomes (RNA-seq) from various tissues as obtained in the study (Delacher and Imbusch 2017, PMID: 28783152). Regulatory T cells (Treg cells) perform two distinct functions: they maintain self-tolerance, and they support organ homeostasis by differentiating into specialized tissue Treg cells. The underlying dataset characterises the epigenetic and transcriptomic modifications for specialized tissue Treg cells.

Author: Charles Imbusch [aut, cre], Michael Delacher [aut], Markus Feuerer [aut], Benedikt Brors [aut]

Maintainer: Charles Imbusch <c.imbusch at>

Citation (from within R, enter citation("tissueTreg")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

tissueTreg HTML R Script
Reference Manual PDF


biocViews ExperimentData, Mus_musculus_Data, RNASeqData, SequencingData, Tissue
Version 1.24.0
License GPL (>= 2)
Depends R (>= 3.5)
System Requirements
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Suggests BiocStyle, knitr, rmarkdown, testthat, ExperimentHub, bsseq, SummarizedExperiment, ggplot2, reshape2
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Follow Installation instructions to use this package in your R session.

Source Package tissueTreg_1.24.0.tar.gz
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