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Example Data Package for CellScore

Bioconductor version: Release (3.19)

This is a data package for normalised homosapien data downloaded from DEE2. The package both downloads, normalises, and filters the data, and provides a way to access the data from a canonical store without needing local processing. This package was built as a way to generate and store canonical test data for CellScore.

Author: Justin Marsh [aut, cre]

Maintainer: Justin Marsh <j.marsh at>

Citation (from within R, enter citation("homosapienDEE2CellScore")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Use the Data in this Data Package HTML R Script
Reference Manual PDF


biocViews ExperimentData, ExperimentHub, ExpressionData, Genome, RNASeqData
Version 1.0.0
License GPL (>= 3)
Imports Rtsne (>= 0.15), utils (>= 3.5.0), ExperimentHub, BiocGenerics, DESeq2, S4Vectors, SummarizedExperiment, getDEE2, MatrixGenerics
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Suggests knitr, rmarkdown, devtools, Biobase(>= 2.39.1), BiocManager, AnnotationHubData, ExperimentHubData, AnnotationHub, CellScore(>= 1.21.4)
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Follow Installation instructions to use this package in your R session.

Source Package homosapienDEE2CellScore_1.0.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone
Source Repository (Developer Access) git clone
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