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SimBenchData: a collection of 35 single-cell RNA-seq data covering a wide range of data characteristics

Bioconductor version: Release (3.19)

The SimBenchData package contains a total of 35 single-cell RNA-seq datasets covering a wide range of data characteristics, including major sequencing protocols, multiple tissue types, and both human and mouse sources.

Author: Yue Cao [aut, cre], Pengyi Yang [aut], Jean Yee Hwa Yang [aut]

Maintainer: Yue Cao <ycao6928 at>

Citation (from within R, enter citation("SimBenchData")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

SimBenchData: a collection of single-cell RNA-seq data covering a wide range of data characteristics HTML R Script
Reference Manual PDF


biocViews ExperimentData, ExperimentHub, RNASeqData, SequencingData, SingleCellData, Tissue
Version 1.12.0
License GPL-3
Depends ExperimentHub
Imports S4Vectors, utils
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Suggests BiocStyle, knitr, rmarkdown, Seurat
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Follow Installation instructions to use this package in your R session.

Source Package SimBenchData_1.12.0.tar.gz
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