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Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)

Bioconductor version: Release (3.19)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, based on GRCm38.p6) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm10")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews AnnotationData, BSgenome, Genetics, Mus_musculus
Version 1.4.3
License Artistic-2.0
Depends R (>= 3.5.0), BSgenome(>= 1.60.0)
Imports BSgenome
System Requirements
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Depends On Me BSgenome.Mmusculus.UCSC.mm10.masked
Imports Me ATACCoGAPS, epiregulon, musicatk, BSgenome.Mmusculus.UCSC.mm10.masked
Suggests Me AneuFinder, BSgenome, circRNAprofiler, cliProfiler, crisprDesign, CRISPRseek, enhancerHomologSearch, factR, gcapc, GenomicRanges, GRaNIE, HiCDCPlus, InPAS, m6Aboost, MiRaGE, monaLisa, Motif2Site, multicrispr, NADfinder, periodicDNA, plyinteractions, scanMiRApp, scmeth, SCOPE, SingleMoleculeFootprinting, ICAMS
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Mmusculus.UCSC.mm10_1.4.3.tar.gz
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