flagme
Analysis of Metabolomics GC/MS Data
Bioconductor version: Release (3.19)
Fragment-level analysis of gas chromatography-massspectrometry metabolomics data.
Author: Mark Robinson <mark.robinson at imls.uzh.ch>, Riccardo Romoli <riccardo.romoli at unifi.it>
Maintainer: Mark Robinson <mark.robinson at imls.uzh.ch>, Riccardo Romoli <riccardo.romoli at unifi.it>
Citation (from within R, enter
citation("flagme")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flagme")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flagme")| \texttt{flagme}: Fragment-level analysis of \\ GC-MS-based metabolomics data | R Script | |
| Using flagme -- Fragment-level analysis of GC-MS-based metabolomics data | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DifferentialExpression, MassSpectrometry, Software |
| Version | 1.60.0 |
| In Bioconductor since | BioC 2.4 (R-2.9) (15.5 years) |
| License | LGPL (>= 2) |
| Depends | gcspikelite, xcms, CAMERA |
| Imports | gplots, graphics, MASS, methods, SparseM, stats, utils |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flagme_1.60.0.tar.gz |
| Windows Binary (x86_64) | flagme_1.60.0.zip |
| macOS Binary (x86_64) | flagme_1.60.0.tgz |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/flagme |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flagme |
| Bioc Package Browser | https://code.bioconductor.org/browse/flagme/ |
| Package Short Url | https://bioconductor.org/packages/flagme/ |
| Package Downloads Report | Download Stats |