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cytolib

C++ infrastructure for representing and interacting with the gated cytometry data


Bioconductor version: Release (3.19)

This package provides the core data structure and API to represent and interact with the gated cytometry data.

Author: Mike Jiang

Maintainer: Mike Jiang <mike at ozette.ai>

Citation (from within R, enter citation("cytolib")):

Installation

To install this package, start R (version "4.4") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cytolib")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cytolib")
Using cytolib HTML R Script
Reference Manual PDF
LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews DataImport, DataRepresentation, FlowCytometry, ImmunoOncology, Preprocessing, Software
Version 2.16.0
In Bioconductor since BioC 3.6 (R-3.4) (7 years)
License AGPL-3.0-only
Depends R (>= 3.4)
Imports RProtoBufLib
System Requirements GNU make, C++11
URL
See More
Suggests knitr, rmarkdown
Linking To BH (>= 1.84.0.0), RProtoBufLib(>= 2.13.1), Rhdf5lib
Enhances
Depends On Me
Imports Me CytoML, flowCore, flowWorkspace
Suggests Me
Links To Me CytoML, flowCore, flowWorkspace
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cytolib_2.16.0.tar.gz
Windows Binary (x86_64) cytolib_2.16.0.zip
macOS Binary (x86_64) cytolib_2.16.0.tgz
macOS Binary (arm64) cytolib_2.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/cytolib
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cytolib
Bioc Package Browser https://code.bioconductor.org/browse/cytolib/
Package Short Url https://bioconductor.org/packages/cytolib/
Package Downloads Report Download Stats