IsoCorrectoRGUI
Graphical User Interface for IsoCorrectoR
Bioconductor version: Release (3.19)
IsoCorrectoRGUI is a Graphical User Interface for the IsoCorrectoR package. IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O...), as well as high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously).
Author: Christian Kohler [cre, aut], Paul Kuerner [aut], Paul Heinrich [aut]
Maintainer: Christian Kohler <christian.kohler at ur.de>
citation("IsoCorrectoRGUI")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("IsoCorrectoRGUI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("IsoCorrectoRGUI")| IsoCorrectoR | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GUI, ImmunoOncology, MassSpectrometry, Metabolomics, Preprocessing, Software |
| Version | 1.20.0 |
| In Bioconductor since | BioC 3.9 (R-3.6) (5.5 years) |
| License | GPL-3 |
| Depends | R (>= 3.6) |
| Imports | IsoCorrectoR, readxl, tcltk2, tcltk, utils |
| System Requirements | |
| URL | https://genomics.ur.de/files/IsoCorrectoRGUI |
See More
| Suggests | knitr, rmarkdown, testthat, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | IsoCorrectoR |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | IsoCorrectoRGUI_1.20.0.tar.gz |
| Windows Binary (x86_64) | IsoCorrectoRGUI_1.20.0.zip |
| macOS Binary (x86_64) | IsoCorrectoRGUI_1.20.0.tgz |
| macOS Binary (arm64) | IsoCorrectoRGUI_1.20.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/IsoCorrectoRGUI |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/IsoCorrectoRGUI |
| Bioc Package Browser | https://code.bioconductor.org/browse/IsoCorrectoRGUI/ |
| Package Short Url | https://bioconductor.org/packages/IsoCorrectoRGUI/ |
| Package Downloads Report | Download Stats |