CB2FindCell |
Main function of distinguish real cells from empty droplets using clustering-based Monte-Carlo test |
CheckBackgroundCutoff |
Check different background cutoffs and recommend an appropriate one |
FilterGB |
Filter out low count genes and barcodes from count matrix |
GetCellMat |
Extract real cell matrix from 'CB2FindCell' output and optionally filter out low-quality cells |
mbrainSub |
Subset of 1k Brain Cells from an E18 Mouse |
QuickCB2 |
All-in-one function from raw data to filtered cell matrix |
Read10xRaw |
Read 10x output data |
Read10xRawH5 |
Read 10x output data |