Gene Set Analysis in R

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Documentation for package ‘GSAR’ version 1.38.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

GSAR-package	Gene Set Analysis in R
AggrFtest	Aggregated F-Test of Variance Using Fisher's Probability Combining Method
findMST2	Union of the First and Second Minimum Spanning Trees
findMST2.PPI	Union of the First and Second Minimum Spanning Trees for PPI Networks
GSAR	Gene Set Analysis in R
GSNCAtest	Gene Sets Net Correlations Analysis
HDP.ranking	High Directed Preorder Ranking of MST
KStest	Multivariate Kolmogorov-Smirnov Test of Means
MDtest	Multivariate Mean Deviation Test of Means
p53DataSet	p53 Dataset of the NCI-60 Cell Lines
plotMST2.pathway	Plot MST2 for a pathway in two conditions
radial.ranking	Radial Ranking of MST
RKStest	Multivariate Radial Kolmogorov-Smirnov Test of Variance
RMDtest	Multivariate Radial Mean Deviation Test of Variance
TestGeneSets	Test a List of Gene Sets Using a Specific Statistical Method
WWtest	Multivariate Generalization of the Wald-Wolfowitz Runs Test