create_differential_topology | Create Example function |
differentiationTest | Differential differentiation |
fateSelectionTest | Differential fate selection Test |
fateSelectionTest-method | Differential fate selection Test |
fateSelectionTest_multipleSamples | Differential fate selection Test with multiple samples |
fateSelectionTest_multipleSamples-method | Differential fate selection Test with multiple samples |
imbalance_score | Imbalance Score |
imbalance_score-method | Imbalance Score |
merge_sds | Merge slingshots datasets |
nLineages | Number of lineages |
nLineages-method | Number of lineages |
progressionTest | Differential Progression Test |
progressionTest-method | Differential Progression Test |
progressionTest_multipleSamples | Differential Progression Test with multiple samples |
progressionTest_multipleSamples-method | Differential Progression Test with multiple samples |
slingshot_conditions | Refitting slingshot per condition |
slingshot_conditions-method | Refitting slingshot per condition |
topologyTest | Differential Topology Test |
topologyTest-method | Differential Topology Test |
topologyTest_multipleSamples | Differential Topology Test with multiple samples |
topologyTest_multipleSamples-method | Differential Topology Test with multiple samples |
toy_dataset | A toy dataset used in the vignette and in the examples |
weights_from_pst | weights_from_pst |
weights_from_pst-method | weights_from_pst |