Package for prediction of zygosity for variants/genes in NGS data

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Documentation for package ‘ZygosityPredictor’ version 1.4.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

aff_germ_copies	calculates how many copies are affected by a germnline small variant
aff_som_copies	calculates how many copies are affected by a somatic small variant
gene_ov	accesor for gene predictions printing detailed info about how a gene status was assigned
GR_GENE_MODEL	germline small variant object
GR_GERM_SMALL_VARS	germline small variant object
GR_HAPLOBLOCKS	haploblocks
GR_SCNA	copynumber object
GR_SOM_SMALL_VARS	somatic small variant object
predict_per_variant	predicts zygosity of a set of variants
predict_zygosity	predicts zygosity of a set of genes of a sample
ZP_ov	accesor for ZygoistyPredictor runs. Prints an overview about the run