OVESEG-test to detect tissue/cell-specific markers
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Documentation for package ‘OVESEG’ version 1.20.0
Help Pages
| OVESEG-package | OVESEG: A package for marker gene test. |
| countBT | RNAseq count data downsampled from GSE60424 |
| nullDistri | Probability of one group being upregulated under null |
| OVESEG | OVESEG: A package for marker gene test. |
| OVESEGtest | OVESEG-test |
| OVESEGtstat | OVESEG-test statistics |
| OVEtstatPermTopM | OVESEG-test statistics after permuting top M groups |
| patternDistri | Probabilities of all upregulation patterns |
| postProbNull | Posterior probabilities of each component null hypothesis |
| pvalueWeightedEst | p-value by weighted permutation scheme |
| RocheBT | mRNA expression data downsampled from GSE28490 (Roche) |