Judging Quality of Clustering Methods using Mutual Information

---

Documentation for package ‘ClusterJudge’ version 1.26.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

ClusterJudge-package	Judging Quality of Clustering Methods using Mutual Information
attribute_mut_inf	calculates the mutual information between each attribute of the entity.attribute pairs
ClusterJudge	Judging Quality of Clustering Methods using Mutual Information
clusterJudge	judges clustering using an entity.attribute table
clusterJudge_z_score	calculates the 'cluster judge' z-score
consolidate_entity_attribute	removes the redundant attributes based on the mutual information between attributes
convert_Yeast_SGDId_2_systematic	converts the SGD Gene Id into the systematic name of the gene
download_Yeast_GO_mapping	downloads the Gene Ontology attributes mapped to Yeast genes
download_Yeast_Go_terms	downloads the description of Gene Ontology attributes
entities_attribute_stats	presents basic statistics on the number of entities per attribute
mi.GO.Yeast	precalculated mutual information between Gene Ontology attributes of Yeast genes
validate_association	validates the associations between entities and attributes
Yeast.GO.assocs	Gene Ontology attributes associated to Yeast Gene entities