GC Aware Peak Caller

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Documentation for package ‘gcapc’ version 1.26.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

bindWidth	ChIP-seq Binding Width And Peak Window Size Estimation
gcapcPeaks	GC Effects Aware Peak Calling
gcEffects	ChIP-seq GC Effects Estimation
peaksCAT	CATplot of Peaks
read5endCoverage	Reads Coverage Using 5-end Base
refinePeaks	Refine Peaks with GC Effects
refineSites	Adjust ChIP-seq Read Count Table