Affinity Network Fusion for Complex Patient Clustering

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Documentation for package ‘ANF’ version 1.24.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

affinity_matrix	Generate a symmetric affinity matrix based on a distance matrix using 'local' Gaussian kernel
ANF	Fuse affinity networks (i.e., matrices) through one-step or two-step random walk
eval_clu	Evaluate clustering result
kNN_graph	Calculate k-nearest-neighbor graph from affinity matrix and normalize it as transition matrix
pod	Finding optimal discrete solutions for spectral clustering
spectral_clustering	spectral_clustering