consensus Independent Component Analysis
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Documentation for package ‘consICA’ version 2.0.0
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| anovaIC | ANOVA test for independent component across factors |
| consICA | Calculate consensus Independent Component Analysis |
| enrichGO | Enrichment analysis of GO-terms based on Ensembl IDs |
| estimateVarianceExplained | Estimate the variance explained by the model |
| getFeatures | Get features from consICA deconvolution result |
| getGO | Assigns IC signatures to Gene Ontologies |
| is.consICA | Is the object is consensus ICA compliant? |
| oneICA | Runs 'fastICA' |
| overlapGO | Similarity of two gene ontologies lists |
| plotICVarianceExplained | Barplot variance explained by each IC |
| samples_data | Samples of gene expression |
| saveReport | Save PDF report with analysis of each independent component |
| setOrientation | Set orientation for independent components |
| sortDataFrame | Sort dataframe |
| survivalAnalysis | Survival analysis based on significant IC |