In-silico methods for genetic finemapping in inbred mice
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Documentation for package ‘MouseFM’ version 1.12.0
Help Pages
| annotate_consequences | Annotate with consequences |
| annotate_mouse_genes | Annotate with genes |
| avail_chromosomes | Available chromosomes |
| avail_consequences | Available consequences |
| avail_strains | Available strains |
| df2GRanges | Data frame to GenomicRanges::GRanges object |
| fetch | Fetch |
| finemap | Finemapping of genetic regions |
| getURL | Get backend service url |
| get_top | Best strain combinations |
| GRanges2df | GenomicRanges::GRanges object to data frame |
| prio | Prioritization of inbred mouse strains for refining genetic regions |
| ref_genome | Reference genome version |
| setURL | Set backend service url |
| vis_reduction_factors | Visualize |