marinerData

DOI: 10.18129/B9.bioc.marinerData  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see marinerData.

ExperimentHub data for the mariner package

Bioconductor version: 3.17

Subsampled Hi-C in HEK cells expressing the NHA9 fusion with an F to S mutated IDR ("FS") or without any mutations to the IDR ("Wildtype" or "WT"). These files are used for testing mariner functions and some examples.

Author: Eric Davis [aut, cre]

Maintainer: Eric Davis <ericscottdavis at outlook.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("marinerData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("marinerData")

 

HTML	R Script	marinerData package
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, ExperimentHub, SequencingData
Version	1.0.0
License	GPL-3
Depends
Imports	utils, ExperimentHub
LinkingTo
Suggests	knitr, rmarkdown, ExperimentHubData, testthat (>= 3.0.0)
SystemRequirements
Enhances
URL
BugReports	https://support.bioconductor.org/t/marinerData
Depends On Me
Imports Me
Suggests Me	mariner
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	marinerData_1.0.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/marinerData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/marinerData
Package Short Url	https://bioconductor.org/packages/marinerData/
Package Downloads Report	Download Stats