RnaSeqSampleSizeData

DOI: 10.18129/B9.bioc.RnaSeqSampleSizeData  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see RnaSeqSampleSizeData.

RnaSeqSampleSizeData

Bioconductor version: 3.17

RnaSeqSampleSizeData package provides the read counts and dispersion distribution from real RNA-seq experiments. It can be used by RnaSeqSampleSize package to estimate sample size and power for RNA-seq experiment design.

Author: Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr

Maintainer: Shilin Zhao <zhaoshilin at gmail.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RnaSeqSampleSizeData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqSampleSizeData")

 

PDF	R Script	RnaSeqSampleSizeData: Read counts and dispersion distribution from real data for sample size estimation of RNA-seq experiments
PDF		Reference Manual
Text		NEWS

Details

biocViews	CancerData, ExperimentData, RNASeqData
Version	1.32.0
License	GPL (>= 2)
Depends	edgeR, R (>= 2.10)
Imports
LinkingTo
Suggests	BiocStyle, knitr
SystemRequirements
Enhances
URL
Depends On Me	RnaSeqSampleSize
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RnaSeqSampleSizeData_1.32.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/RnaSeqSampleSizeData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RnaSeqSampleSizeData
Package Short Url	https://bioconductor.org/packages/RnaSeqSampleSizeData/
Package Downloads Report	Download Stats