FANTOM3and4CAGE

DOI: 10.18129/B9.bioc.FANTOM3and4CAGE  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see FANTOM3and4CAGE.

CAGE data from FANTOM3 and FANTOM4 projects

Bioconductor version: 3.17

CAGE (Cap Analysis Gene Expression) data from FANTOM3 and FANTOM4 projects produced by RIKEN Omics Science Center.

Author: Vanja Haberle, Department of Biology, University of Bergen, Norway <vanja.haberle at bio.uib.no>

Maintainer: Vanja Haberle <vanja.haberle at bio.uib.no>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FANTOM3and4CAGE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FANTOM3and4CAGE")

 

PDF	R Script	FANTOM3and4CAGE
PDF		Reference Manual

Details

biocViews	ExperimentData, Tissue
Version	1.36.0
License	GPL-3
Depends	R (>= 2.15.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	CAGEr
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	FANTOM3and4CAGE_1.36.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/FANTOM3and4CAGE
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/FANTOM3and4CAGE
Package Short Url	https://bioconductor.org/packages/FANTOM3and4CAGE/
Package Downloads Report	Download Stats