DOI: 10.18129/B9.bioc.JASPAR2022  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see JASPAR2022.

Data package for JASPAR database (version 2022)

Bioconductor version: 3.17

JASPAR is an open-access database containing manually curated, non-redundant transcription factor (TF) binding profiles for TFs across six taxonomic groups. In this 9th release, we expanded the CORE collection with 341 new profiles (148 for plants, 101 for vertebrates, 85 for urochordates, and 7 for insects), which corresponds to a 19% expansion over the previous release. To search thisdatabases, please use the package TFBSTools (>= 1.31.2).

Author: Damir Baranasic [aut, cre]

Maintainer: Damir Baranasic <damir.baranasic at lms.mrc.ac.uk>

Citation (from within R, enter citation("JASPAR2022")):


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HTML R Script JASPAR2022
PDF   Reference Manual


biocViews AnnotationData, AnnotationHub, FunctionalAnnotation
Version 0.99.7
License GPL-2
Depends R (>= 4.1.0), methods, BiocFileCache, utils
Suggests knitr, rmarkdown, BiocStyle, TFBSTools(>= 1.31.2)
URL http://jaspar.genereg.net/
Depends On Me
Imports Me
Suggests Me GRaNIE, MethReg
Links To Me

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